Living organisms are categorized into two major groups depending on whether or not their cells contain a nucleus. The presence of a nucleus and other membranous organelles is the defining characteristic of eukaryotic organisms. The nucleus in eukaryotic cells is a membrane-bound structure that houses the genetic material, DNA, which is complexed with an array of acidic and basic proteins into thin fibers. During non-divisional phases of the cell cycle, the fibers are uncoiled and dispersed into chromatin (as mentioned above). During mitosis and meiosis, chromatin fibers coil and condense into chromosomes. Also present in the nucleus is the nucleolus, an amorphous component where ribosomal RNA (rRNA) is synthesized and where the initial stages of ribosomal assembly occur. The portions of DNA that encode rRNA are collectively referred to as the nucleolus organizer region, or the NOR.
E. coli undergoing cell division (electron micro-graph)
Prokaryotic organisms, of which there are two major groups, lack a nuclear envelope and membranous organelles. For the purpose of our brief discussion here, we will consider the eubacteria, the other group being the more ancient bacteria referred to as archaea. In eubacteria, such as Escherichia coli, the genetic material is present as a long, circular DNA molecule that is compacted into an unenclosed region called the nucleoid. Part of the DNA may be attached to the cell membrane, but in general the nucleoid extends through a large part of the cell. Although the DNA is compacted, it does not undergo the extensive coiling characteristic of the stages of mitosis, during which the chromosomes of eukaryotes become visible. Nor is the DNA associated as extensively with proteins as is eukaryotic DNA.
Above given figure, which shows two bacteria forming by cell division, illustrates the nucleoid regions containing the bacterial chromosomes. Prokaryotic cells do not have a distinct nucleolus but do contain genes that specify rRNA molecules.
The remainder of the eukaryotic cell within the plasma membrane, excluding the nucleus, is referred to as cytoplasm and includes a variety of extranuclear cellular organelles. In the cytoplasm, a nonparticulate, colloidal material referred to as the cytosol surrounds and encompasses the cellular organelles. The cytoplasm also includes an extensive system of tubules and filaments, comprising the cytoskeleton, which provides a lattice of support structures within the cell. Consisting primarily of microtubules, which are made of the protein tubulin, and microfilaments, which derive from the protein actin, this structural framework maintains cell shape, facilitates cell mobility, and anchors the various organelles.
One organelle, the membranous endoplasmic reticulum (ER), compartmentalizes the cytoplasm, greatly increasing the surface area available for biochemical synthesis. The ER appears smooth in places where it serves as the site for synthesizing fatty acids and phospholipids; in other places, it appears rough because it is studded with ribosomes. Ribosomes serve as sites where genetic information contained in messenger RNA (mRNA) is translated into proteins.
Three other cytoplasmic structures are very important in the eukaryotic cell’s activities: mitochondria, chloroplasts, and centrioles. Mitochondria are found in most eukaryotes, including both animal and plant cells, and are the sites of the oxidative phases of cell respiration. These chemical reactions generate large amounts of the energy-rich molecule adenosine triphosphate (ATP). Chloroplasts, which are found in plants, algae, and some protozoans, are associated with photosynthesis, the major energy-trapping process on Earth. Both mitochondria and chloroplasts contain DNA in a form distinct from that found in the nucleus. They are able to duplicate themselves and transcribe and translate their own genetic information. It is interesting to note that the genetic machinery of mitochondria and chloroplasts closely resembles that of prokaryotic cells. This and other observations have led to the proposal that these organelles were once primitive free-living organisms that established symbiotic relationships with primitive eukaryotic cells. This theory concerning the evolutionary origin of these organelles is called the endosymbiont hypothesis.
Animal cells and some plant cells also contain a pair of complex structures called centrioles. These cytoplasmic bodies, located in a specialized region called the centrosome, are associated with the organization of spindle fibers that function in mitosis and meiosis. In some organisms, the centriole is derived from another structure, the basal body, which is associated with the formation of cilia and flagella (hair-like and whip-like structures for propelling cells or moving materials). Over the years, many reports have suggested that centrioles and basal bodies contain DNA, which could be involved in the replication of these structures. This idea is still being investigated.
The organization of spindle fibers by the centrioles occurs during the early phases of mitosis and meiosis. These fibers play an important role in the movement of chromosomes as they separate during cell division. They are composed of arrays of microtubules consisting of polymers of the protein tubulin.